Evidence for a Higher Number of Species of Odontotermes (Isoptera) than Currently Known from Peninsular Malaysia from Mitochondrial DNA Phylogenies
Identifieur interne : 000696 ( Main/Exploration ); précédent : 000695; suivant : 000697Evidence for a Higher Number of Species of Odontotermes (Isoptera) than Currently Known from Peninsular Malaysia from Mitochondrial DNA Phylogenies
Auteurs : Shawn Cheng [Malaisie] ; Laurence G. Kirton [Malaisie] ; Jothi M. Panandam [Malaisie] ; Siti S. Siraj [Malaisie] ; Kevin Kit-Siong Ng [Malaisie] ; Soon-Guan Tan [Malaisie]Source :
- PLoS ONE [ 1932-6203 ] ; 2011.
Abstract
Termites of the genus
Url:
DOI: 10.1371/journal.pone.0020992
PubMed: 21687629
PubMed Central: 3110805
Affiliations:
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Evidence for a Higher Number of Species of <italic>Odontotermes</italic> (Isoptera) than Currently Known from Peninsular Malaysia from Mitochondrial DNA Phylogenies</title><author><name sortKey="Cheng, Shawn" sort="Cheng, Shawn" uniqKey="Cheng S" first="Shawn" last="Cheng">Shawn Cheng</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Tropical Forest Biodiversity Centre, Forest Research Institute Malaysia, Kepong, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Tropical Forest Biodiversity Centre, Forest Research Institute Malaysia, Kepong, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation></author><author><name sortKey="Kirton, Laurence G" sort="Kirton, Laurence G" uniqKey="Kirton L" first="Laurence G." last="Kirton">Laurence G. Kirton</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Tropical Forest Biodiversity Centre, Forest Research Institute Malaysia, Kepong, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Tropical Forest Biodiversity Centre, Forest Research Institute Malaysia, Kepong, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation></author><author><name sortKey="Panandam, Jothi M" sort="Panandam, Jothi M" uniqKey="Panandam J" first="Jothi M." last="Panandam">Jothi M. Panandam</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>Faculty of Agriculture, Universiti Putra Malaysia, Serdang, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Faculty of Agriculture, Universiti Putra Malaysia, Serdang, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation></author><author><name sortKey="Siraj, Siti S" sort="Siraj, Siti S" uniqKey="Siraj S" first="Siti S." last="Siraj">Siti S. Siraj</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>Faculty of Agriculture, Universiti Putra Malaysia, Serdang, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Faculty of Agriculture, Universiti Putra Malaysia, Serdang, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation></author><author><name sortKey="Ng, Kevin Kit Siong" sort="Ng, Kevin Kit Siong" uniqKey="Ng K" first="Kevin Kit-Siong" last="Ng">Kevin Kit-Siong Ng</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Tropical Forest Biodiversity Centre, Forest Research Institute Malaysia, Kepong, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Tropical Forest Biodiversity Centre, Forest Research Institute Malaysia, Kepong, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation></author><author><name sortKey="Tan, Soon Guan" sort="Tan, Soon Guan" uniqKey="Tan S" first="Soon-Guan" last="Tan">Soon-Guan Tan</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">21687629</idno><idno type="pmc">3110805</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3110805</idno><idno type="RBID">PMC:3110805</idno><idno type="doi">10.1371/journal.pone.0020992</idno><date when="2011">2011</date><idno type="wicri:Area/Pmc/Corpus">000640</idno><idno type="wicri:Area/Pmc/Curation">000640</idno><idno type="wicri:Area/Pmc/Checkpoint">000511</idno><idno type="wicri:Area/Ncbi/Merge">000236</idno><idno type="wicri:Area/Ncbi/Curation">000236</idno><idno type="wicri:Area/Ncbi/Checkpoint">000236</idno><idno type="wicri:Area/Main/Merge">000698</idno><idno type="wicri:Area/Main/Curation">000696</idno><idno type="wicri:Area/Main/Exploration">000696</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Evidence for a Higher Number of Species of <italic>Odontotermes</italic> (Isoptera) than Currently Known from Peninsular Malaysia from Mitochondrial DNA Phylogenies</title><author><name sortKey="Cheng, Shawn" sort="Cheng, Shawn" uniqKey="Cheng S" first="Shawn" last="Cheng">Shawn Cheng</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Tropical Forest Biodiversity Centre, Forest Research Institute Malaysia, Kepong, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Tropical Forest Biodiversity Centre, Forest Research Institute Malaysia, Kepong, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation></author><author><name sortKey="Kirton, Laurence G" sort="Kirton, Laurence G" uniqKey="Kirton L" first="Laurence G." last="Kirton">Laurence G. Kirton</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Tropical Forest Biodiversity Centre, Forest Research Institute Malaysia, Kepong, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Tropical Forest Biodiversity Centre, Forest Research Institute Malaysia, Kepong, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation></author><author><name sortKey="Panandam, Jothi M" sort="Panandam, Jothi M" uniqKey="Panandam J" first="Jothi M." last="Panandam">Jothi M. Panandam</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>Faculty of Agriculture, Universiti Putra Malaysia, Serdang, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Faculty of Agriculture, Universiti Putra Malaysia, Serdang, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation></author><author><name sortKey="Siraj, Siti S" sort="Siraj, Siti S" uniqKey="Siraj S" first="Siti S." last="Siraj">Siti S. Siraj</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>Faculty of Agriculture, Universiti Putra Malaysia, Serdang, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Faculty of Agriculture, Universiti Putra Malaysia, Serdang, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation></author><author><name sortKey="Ng, Kevin Kit Siong" sort="Ng, Kevin Kit Siong" uniqKey="Ng K" first="Kevin Kit-Siong" last="Ng">Kevin Kit-Siong Ng</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Tropical Forest Biodiversity Centre, Forest Research Institute Malaysia, Kepong, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Tropical Forest Biodiversity Centre, Forest Research Institute Malaysia, Kepong, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation></author><author><name sortKey="Tan, Soon Guan" sort="Tan, Soon Guan" uniqKey="Tan S" first="Soon-Guan" last="Tan">Soon-Guan Tan</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang, Selangor, Malaysia</addr-line></nlm:aff><country xml:lang="fr">Malaisie</country><wicri:regionArea>Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang, Selangor</wicri:regionArea><wicri:noRegion>Selangor</wicri:noRegion></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2011">2011</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Termites of the genus <italic>Odontotermes</italic> are important decomposers in the Old World tropics and are sometimes important pests of crops, timber and trees. The species within the genus often have overlapping size ranges and are difficult to differentiate based on morphology. As a result, the taxonomy of <italic>Odontotermes</italic> in Peninsular Malaysia has not been adequately worked out. In this study, we examined the phylogeny of 40 samples of <italic>Odontotermes</italic> from Peninsular Malaysia using two mitochondrial DNA regions, that is, the 16S ribosomal RNA and cytochrome oxidase subunit I genes, to aid in elucidating the number of species in the peninsula. Phylogenies were reconstructed from the individual gene and combined gene data sets using parsimony and likelihood criteria. The phylogenies supported the presence of up to eleven species in Peninsular Malaysia, which were identified as <italic>O. escherichi</italic>, <italic>O. hainanensis</italic>, <italic>O</italic>. <italic>javanicus</italic>, <italic>O</italic>. <italic>longignathus</italic>, <italic>O. malaccensis</italic>, <italic>O. oblongatus</italic>, <italic>O</italic>. <italic>paraoblongatus</italic>, <italic>O</italic>. <italic>sarawakensis</italic>, and three possibly new species. Additionally, some of our taxa are thought to comprise a complex of two or more species. The number of species found in this study using DNA methods was more than the initial nine species thought to occur in Peninsular Malaysia. The support values for the clades and morphology of the soldiers provided further evidence for the existence of eleven or more species. Higher resolution genetic markers such as microsatellites would be required to confirm the presence of cryptic species in some taxa.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Rouland Lefevre, C" uniqKey="Rouland Lefevre C">C Rouland-Lefèvre</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Eggleton, Pe" uniqKey="Eggleton P">PE Eggleton</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bignell, De" uniqKey="Bignell D">DE Bignell</name></author><author><name sortKey="Eggleton, Pe" uniqKey="Eggleton P">PE Eggleton</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mitchell, Jd" uniqKey="Mitchell J">JD Mitchell</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kirton, Lg" uniqKey="Kirton L">LG Kirton</name></author><author><name sortKey="Cheng, S" uniqKey="Cheng S">S Cheng</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Darlington, Jpec" uniqKey="Darlington J">JPEC Darlington</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Davison, D" uniqKey="Davison D">D Davison</name></author><author><name sortKey="Darlington, Jpec" uniqKey="Darlington J">JPEC Darlington</name></author><author><name sortKey="Cook, Ce" uniqKey="Cook C">CE Cook</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Darlington, Jpec" uniqKey="Darlington J">JPEC Darlington</name></author><author><name sortKey="Benson, Rb" uniqKey="Benson R">RB Benson</name></author><author><name sortKey="Cook, Ce" uniqKey="Cook C">CE Cook</name></author><author><name sortKey="Walker, G" uniqKey="Walker G">G Walker</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Holmgren, N" uniqKey="Holmgren N">N Holmgren</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ahmad, M" uniqKey="Ahmad M">M Ahmad</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tho, Yp" uniqKey="Tho Y">YP Tho</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ahmad, M" uniqKey="Ahmad M">M Ahmad</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chhotani, Ob" uniqKey="Chhotani O">OB Chhotani</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, H" uniqKey="Liu H">H Liu</name></author><author><name sortKey="Beckenbach, A" uniqKey="Beckenbach A">A Beckenbach</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Aanen, Dk" uniqKey="Aanen D">DK Aanen</name></author><author><name sortKey="Eggleton, Pe" uniqKey="Eggleton P">PE Eggleton</name></author><author><name sortKey="Rouland Lefevre, C" uniqKey="Rouland Lefevre C">C Rouland-Lefevre</name></author><author><name sortKey="Guldberg Froslev, T" uniqKey="Guldberg Froslev T">T Guldberg-Froslev</name></author><author><name sortKey="Rosendahl, S" uniqKey="Rosendahl S">S Rosendahl</name></author><author><name sortKey="Boomsma, J" uniqKey="Boomsma J">J Boomsma</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Simon, C" uniqKey="Simon C">C Simon</name></author><author><name sortKey="Frati, F" uniqKey="Frati F">F Frati</name></author><author><name sortKey="Beckenbach, A" uniqKey="Beckenbach A">A Beckenbach</name></author><author><name sortKey="Crespi, B" uniqKey="Crespi B">B Crespi</name></author><author><name sortKey="Liu, H" uniqKey="Liu H">H Liu</name></author><author><name sortKey="Flook, P" uniqKey="Flook P">P Flook</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Posada, D" uniqKey="Posada D">D Posada</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hall, Ta" uniqKey="Hall T">TA Hall</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Swofford, Dl" uniqKey="Swofford D">DL Swofford</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Stamatakis, A" uniqKey="Stamatakis A">A Stamatakis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Roonwal, Ml" uniqKey="Roonwal M">ML Roonwal</name></author><author><name sortKey="Chhotani, Ob" uniqKey="Chhotani O">OB Chhotani</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Malaisie</li></country></list><tree><country name="Malaisie"><noRegion><name sortKey="Cheng, Shawn" sort="Cheng, Shawn" uniqKey="Cheng S" first="Shawn" last="Cheng">Shawn Cheng</name></noRegion><name sortKey="Cheng, Shawn" sort="Cheng, Shawn" uniqKey="Cheng S" first="Shawn" last="Cheng">Shawn Cheng</name><name sortKey="Kirton, Laurence G" sort="Kirton, Laurence G" uniqKey="Kirton L" first="Laurence G." last="Kirton">Laurence G. Kirton</name><name sortKey="Ng, Kevin Kit Siong" sort="Ng, Kevin Kit Siong" uniqKey="Ng K" first="Kevin Kit-Siong" last="Ng">Kevin Kit-Siong Ng</name><name sortKey="Panandam, Jothi M" sort="Panandam, Jothi M" uniqKey="Panandam J" first="Jothi M." last="Panandam">Jothi M. Panandam</name><name sortKey="Siraj, Siti S" sort="Siraj, Siti S" uniqKey="Siraj S" first="Siti S." last="Siraj">Siti S. Siraj</name><name sortKey="Tan, Soon Guan" sort="Tan, Soon Guan" uniqKey="Tan S" first="Soon-Guan" last="Tan">Soon-Guan Tan</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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